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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47940697, gi|...
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFIFNFLFS PLPTPALICL LTFGTAIFLW LINRPQPVLP LIDLDNQSVG IEGGARRGAF  60
   61 QKNNDLILYY FSDAKTLYEV FQRGLAVSDN GPCLGYRKPN QPYKWISYKQ VSDRAEYLGS 120
  121 CLLHKGYKPS QDQFIGIFAQ NRPEWVISEL ACYTYSMVAV PLYDTLGAEA IIYVINRADI 180
  181 SVVICDTPQK ATMLIENVEK DLTPGLKTVI LMDPFDDDLM KRGEKCGIEM LSLHDAENLG 240
  241 KENFKKPVPP NPEDLSVICF TSGTTGDPKG AMLTHQNIVS NMAAFLKFLE PIFQPTPEDV 300
  301 TISYLPLAHM FERLVQGVIF SCGGKIGFFQ GDIRLLPDDM KALKPTVFPT VPRLLNRVYD 360
  361 KVQNEAKTPL KKFLLNLAII SKFNEVRNGI IRRNSLWDKL VFSKIQSSLG GKVRLMITGA 420
  421 APISTPVLTF FRAAMGCWVF EAYGQTECTA GCSITSPGDW TAGHVGTPVS CNFVKLEDVA 480
  481 DMNYFSVNNE GEICIKGNNV FKGYLKDPEK TQEVLDKDGW LHTGDIGRWL PNGTLKIIDR 540
  541 KKNIFKLAQG EYIAPEKIEN VYSRSRPILQ VFVHGESLRS FLIGVVVPDP ESLPSFAAKI 600
  601 GVKGSFEELC QNQCVKKAIL EDLQKVGKEG GLKSFEQVKS IFVHPEPFSI ENGLLTPTLK 660
  661 AKRVELAKFF QTQIKSLYES IEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle