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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HSP7I_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVALLRSF RRREVQMASV SAFKSVSANG KNSMFGKLGY LARPFCSRPV GNDVIGIDLG  60
   61 TTNSCVSVME GKTARVIENA EGSRTTPSVV AMNQKGELLV GTPAKRQAVT NPTNTIFGSK 120
  121 RLIGRRFDDP QTQKEMKMVP YKIVKAPNGD AWVEANGQKF SPSQIGANVL TKMKETAEAY 180
  181 LGKSINKAVV TVPAYFNDAQ RQATKDAGKI AGLDVQRIIN EPTAAALSYG MNNKEGVIAV 240
  241 FDLGGGTFDV SILEISSGVF EVKATNGDTF LGGEDFDNTL LEYLVNEFKR SDNIDLTKDN 300
  301 LALQRLREAA EKAKIELSST TQTEINLPFI TADASGAKHL NITLTRSKFE GLVGKLIERT 360
  361 RSPCQNCLKD AGVTIKEVDE VLLVGGMTRV PKVQEIVSEI FGKSPCKGVN PDEAVAMGAA 420
  421 IQGGILRGDV KDLLLLDVVP LSLGIETLGA VFTKLIPRNT TIPTKKSQVF STAADNQMQV 480
  481 GIKVLQGERE MAADNKVLGE FDLVGIPPAP RGMPQIEVTF DIDANGITTV SAKDKATGKE 540
  541 QNITIRSSGG LSDDEINRMV KEAELNAQKD QEKKQLIDLR NSADTTIYSV EKSLSEYREK 600
  601 IPAEIASEIE TAVSDLRTAM AGEDVEDIKA KVEAANKAVS KIGEHMSKGS GSSGSDGSSG 660
  661 EGTSGTEQTP EAEFEEASGS RK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle