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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30584215, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVQGSQRRL LGSLNSTPTA IPQLGLAANQ TGARCLEVSI SDGLFLSLGL VSLVENALVV  60
   61 ATIAKNRNLH SPMYCFICCL ALSDLLVSGS NVLETAVILL LEAGALVARA AVLQQLDNVI 120
  121 DVITCSSMLS SLCFLGAIAV DRYISIFYAL RYHSIVTLPR ARRAVAAIWV ASVVFSTLFI 180
  181 AYYDHVAVLL CLVVFFLAML VLMAVLYVHM LARACQHAQG IARLHKRQRP VHQGFGLKGA 240
  241 VTLTILLGIF FLCWGPFFLH LTLIVLCPEH PTCGCIFKNF NLFLALIICN AIIDPLIYAF 300
  301 HSQELRRTLK EVLTCSCSQD RALVSWDVKS LGGSVCQELL PQQPQEKGLC DQKASSTALQ 360
  361 RLLQKEFWEV ISDEHGIDPS GNYVGDSDLQ LERISVYYNE ASSHKYVPRA ILVDLEPGTM 420
  421 DSVRSGAFGH LFRPDNFIFG QSGAGNNWAK GHYTEGAELV DSVLDVVRKE CENCDCLQGF 480
  481 QLTHSLGGGT GSGMGTLLIS KVREEYPDRI MNTFSVVPSP KVSDTVVEPY NATLSIHQLV 540
  541 ENTDETYCID NEALYDICFR TLKLATPTYG DLNHLVSATM SGVTTSLRFP GQLNADLRKL 600
  601 AVNMVPFPRL HFFMPGFAPL TARGSQQYRA LTVPELTQQM FDAKNMMAAC DPRHGRYLTV 660
  661 ATVFRGRMSM KEVDEQMLAI QSKNSSYFVE WIPNNVKVAV CDIPPRGLKM SSTFIGNSTA 720
  721 IQELFKRISE QFTAMFRRKA FLHWYTGEGM DEMEFTEAES NMNDLVSEYQ QYQDATAEEE 780
  781 GEMYEDDEEE SEAQGPKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle