YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51518039, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAAFLLCQY TLQSVFHFAG EDPGFFNIEM LQFPFYPKCE VCTADVNISI VFKVGEANRH  60
   61 LDLYFGPITP ITQNIYQPLH ASGGIENVTS LFSLELLGAR TMALTMRSII FPINVSRDEE 120
  121 HVSMEALYIY FLDAFDILWC QRVQMKEPVY LIPKKMPPVV WNHCNSTNIT AVVRAQGMDI 180
  181 SVPISLPTMP LATKFSLHME MTSEGIDMLC RNEGDPISPV LPGNNNFAIK CDGDKPHFAS 240
  241 AGVLTPASPS TTPAPIGGYV YNLTLMPRPV PRFLGNESTL YIMYTEDPDS EHGDFCLKAP 300
  301 IMFSDKLPTI QDMPAQTQVV LYTGQNATYQ LQMAPLENNT APNVTVTAFW AWANDTSKDF 360
  361 KCKWMLHTNN QQPVGCERMA GQFLSNRTFE LTVEVDNITS KTLIISRAAT NVTAVAYQVT 420
  421 FTKAPDPVTS APTRQPEDPT LTTPTGMTSP NVTSPTSVST TPNATSPTSV STTPNATSPT 480
  481 SVSTTPNDTS PTTVVSGSTS VATSPPSGAT SPNATSPKPA SISPTPGVTE TPSVITNTPY 540
  541 PSSIGPSSSP GSGLTSPPRT NYTPRVNSTS VTPPLTSTHE TGSKNITETT PEAPNTNHVS 600
  601 TASPTPPPGT TGQTAGPGNS STSPEPGATK VTTILPAQNA TSPSATSSQE TTVPTGTPAG 660
  661 GKANVTTEPG SGGSTQLPTG GGNSATTVYN ATTPPPPTNS STLRPRWTST GPPATTTQAT 720
  721 VPVPPTIKPE GSNLSMLVLQ WASLGVLTLL LLLVISDCAF RRSSSRIHTY THPPYDDEFE 780
  781 TAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle