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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6691125
Protein type: Globular with Signal Peptide
Type Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFPFFFFLL FLFCSTHCIS FAAVSAHNRR VLHESFFPID SPPPSQPPIP APPAPPTPYP  60
   61 FQPSTPDNNN PFFPTYRSPP PPPPPPSPSS LVSFPANISD INLPNTSKSK HVSSKLIITA 120
  121 ITCVLAAIIV LSIAICLHAK KRRRHFNDPK TQRSDNSNRL NHGSSKNDGN TNNSIPKLQQ 180
  181 PSQTSSEFLY LGTIVNSHGG INSGSNPDTA PSSRKMASPE LRPLPPLNGR NLSQNYRNTR 240
  241 NDDDFYSTEE SVGYIESSFG AGSLSRRGFA AVEVNKFVGS SLSGSDSSSS SGSGSPNRSV 300
  301 SLSISPPVSV SPKRESCSRP KSPELIAVVT PPPPQRPPPP PPPFVHGPQV KVTANESPVL 360
  361 ISPMEKNDQN VENHSIEKNE EKSEEILKPK LKTLHWDKVR ASSDCEMVWD QLKSSSFKLN 420
  421 EEMIETLFVV KNPTLNTSAT AKHFVVSSMS QENRVLDPKK SQNIAILLRV LNGTTEEICE 480
  481 AFLEGNAENI GTELLEILLK MAPSKEEERK LKEYKDDSPF KLGPAEKFLK AVLDIPFAFK 540
  541 RIDAMLYISN FDYEVDYLGN SFETLEAACE ELRSSRMFLK LLEAVLKTGN RMNVGTNRGD 600
  601 AHAFKLDTLL KLVDVKGADG KTTLLHFVVQ EIIKSEGARL SGGNQNHQQS TTNDDAKCKK 660
  661 LGLQVVSNIS SELINVKKSA AMDSEVLHND VLKLSKGIQN IAEVVRSIEA VGLEESSIKR 720
  721 FSESMNRFMK VAEEKILRLQ AQETLAMSLV KEITEYVHGD SAREEAHPFR IFMVVKDFLM 780
  781 ILDCVCKEVG TINERTIVSS AQKFPVPVNP NLQPVISGFR AKRLHSSSDE ESSSP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle