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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19074392
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFQKYLKRN LYAPYKYNYL DYENLRERFK KEGFASSDED EFVRELDANI KRVFGFVESK  60
   61 YSEFVQRLRT LEKKPPKEAR SKIKEMTEEM RHFAEFIRIN VIGFKKLLRR HDKHTEYRLL 120
  121 PSYKPMLKGK IKSVEDLDEL IYKASRISLK AIETKKKNTE SNCMFIRMTD KYWVHKENVV 180
  181 PVKFYITQHL PIYVFSKGNE EKSPYSSWDK NSHDTCISSV YFDNVAFDLY GERLKKLHHS 240
  241 EAIRIRWYTS EVPDVVFVER KKHEDGWTGE SSKKLRFMIN EKQVLKYING EDVWEDVRRL 300
  301 NGDEDVRMLY EEVQSSIVNR GLRPVVRTFY RRSAFQIPND SSVRVSLDTD LCMIKECSDA 360
  361 EIVNPTYPIT RWRRSDVNCD FPFRNVPKSE IVRFPHAILE IKTQNFDETK PKWIEELING 420
  421 PLVEHVHKFS KYLHGCAVLY PFIQDIPYWL PQVAVDIRKD PFHPDVDKKS FENTVLVDVP 480
  481 ADSDPSNSEK LSPIDVHGKR ISIPVRVEPK VFFANERTFL SWVQFAIFLG GIGSALLGLG 540
  541 DERASFSGLI LIIVAIIFSF YSLYLYLWRA SMIRQRDPGP YDDIYGPAVL VCVFLVAMGL 600
  601 SVFFKFPLKR F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle