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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51873075
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSVLLTAVF IALQFATGLA NPDSKRLYDD LLSNYNRLIR PVGNNSDRLT VKMGLRLSQL  60
   61 IDVNLKNQIM TTNVWVEQEW NDYKLKWNPD DYGGVDTLHV PSEHIWLPDI VLYNNADGNY 120
  121 EVTIMTKAIL HHTGKVVWKP PAIYKSFCEI DVEYFPFDEQ TCFMKFGSWT YDGYMVDLRH 180
  181 LQQTPDSDNI DIGIDLQDYY ISVEWDIMKV PAVRNEKFYS CCEEPYPDII FNITLRRKTL 240
  241 FYTVNLIIPC VGISFLSVLV FYLPSDSGEK ISLCISILLS LTVFFLLLAE IIPPTSLTVP 300
  301 LLGKYLLFTM MLVTLSVVVT IAVLNVNFRS PVTHRMAPWV HRVFIELLPK VLCIERPKKE 360
  361 DEPSDNDDQT PTDVLTDVFQ VPPDVEKYVG FCGKEYGTDF DIPALPPSRF DVAASGGVGP 420
  421 CFGEPPLPAL PLPGGDDDLF SPTGNGDMSP TCCGDLSPTF EKPLLREMEK TIEASRFVAQ 480
  481 HVRNKDKFES VKEDWKYVAL VLDRLFLWIF TIACVLGTCL IILQAPSLYD NTQPIDAMYS 540
  541 KIAKKKMELL KMGSENV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle