YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51457940
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTFTSSSA IHGSLSSSSS SYEQPKVSQL GTFQPLDRPQ LLSSTVLNSR RRSAVKPLYA  60
   61 EPKRNDSIVP SAATIVAPEV GESVEAEDFE KLAKELQNAS PLEVMDKALE KFGDDIAIAF 120
  121 SGAEDVALIE YAHLTGRPYR VFSLDTGRLN PETYQLFDTV EKHYGIRIEY MFPDSVEVQA 180
  181 LVRTKGLFSF YEDGHQECCR VRKVRPLRRA LKGLRAWITG QRKDQSPGTR SEIPIVQVDP 240
  241 SFEGLDGGAG SLVKWNPVAN VDGKDIWNFL RAMNVPVNSL HSQGYVSIGC EPCTRPVLPG 300
  301 QHEREGRWWW EDAKAKECGL HKGNIKDETV NGAAQTNGTA TVADIFDTKD IVTLSKPGVE 360
  361 NLVKLEDRRE PWLVVLYAPW CQFCQAMEGS YVELAEKLAG SGVKVGKFRA DGDQKAFAQE 420
  421 ELQLGSFPTI LFFPKHSSKA IKYPSEKRDV DSLLAFVNAL R

Type	Start	End	Confidence
Signal Peptide	1	20	0.84
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	461	0.99