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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|162461937, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEASAGLVAG SHNRNELVLI RGHEDPKPLR ALSGQVCEIC GDEVGLTVDG DLFVACNECG  60
   61 FPVCRPCYEY ERREGTQNCP QCKTRYKRLK GSPRVAGDDD EEDIDDLEHE FNIDDENQQR 120
  121 QLEGNMQNSQ ITEAMLHGRM SYGRGPDDGD GNNTPQIPPI ITGSRSVPVS GEFPITNGYG 180
  181 HGEVSSSLHK RIHPYPVSEP GSAKWDEKKE VSWKERMDDW KSKQGILGGG ADPEDMDADV 240
  241 ALNDEARQPL SRKVSIASSK VNPYRMVIVV RLVVLAFFLR YRILHPVPDA IGLWLVSIIC 300
  301 EIWFAISWIL DQFPKWFPID RETYLDRLSL RYEREGEPSL LSAVDLFVST VDPLKEPPLV 360
  361 TANTVLSILA VDYPVDKVSC YVSDDGASML TFESLSETAE FARKWVPFCK KFGIEPRAPE 420
  421 FYFSLKVDYL KDKVQPTFVQ ERRAMKREYE EFKVRINALV AKAMKVPAEG WIMKDGTPWP 480
  481 GNNTRDHPGM IQVFLGHSGG HDTEGNELPR LVYVSREKRP GFQHHKKAGA MNALIRVSAV 540
  541 LTNAPFMLNL DCDHYINNSK AIREAMCFLM DPQVGRKVCY VQFPQRFDGI DVHDRYANRN 600
  601 TVFFDINMKG LDGIQGPVYV GTGCVFRRQA LYGYNPPKGP KRPKMVTCDC CPCFGRKKRK 660
  661 HAKDGLPEGT ADMGVDSDKE MLMSHMNFEK RFGQSAAFVT STLMEEGGVP PSSSPAALLK 720
  721 EAIHVISCGY EDKTDWGLEL GWIYGSITED ILTGFKMHCR GWRSVYCMPK RAAFKGSAPI 780
  781 NLSDRLNQVL RWALGSVEIF FSRHSPLLYG YKNGNLKWLE RFAYINTTIY PFTSLPLLAY 840
  841 CTLPAVCLLT GKFIMPSIST FASLFFIALF MSIFATGILE MRWSGVSIEE WWRNEQFWVI 900
  901 GGVSAHLFAV VQGLLKVLAG IDTNFTVTSK ATGDEDDEFA ELYAFKWTTL LIPPTTLLII 960
  961 NVIGVVAGIS DAINNGYQSW GPLFGKLFFA FWVIVHLYPF LKGLMGRQNR TPTVVVIWSI1020
 1021 LLASIFSLLW VRIDPFIVRT KGPDVRQCGI NC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle