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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BEST3_MOUSE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVTYSSKVA NATFFGFHRL LLKWRGSIYK LLYREFIVFA VLYTAISLVY RLLLTGAQKR  60
   61 YFEKLSIYCD RYAEQIPVTF VLGFYVTLVV NRWWNQFVNL PWPDRLMLLI SSSVHGSDQH 120
  121 GRLLRRTLMR YVNLTSLLIF RSVSTAVYKR FPTMDHVVEA GFMTADERKL FDHLKSPHLK 180
  181 YWVPFIWFGN LATKARNEGR IRDSVDLQSL MTEMNRYRSW CSLLFGYDWV GIPLVYTQVV 240
  241 TLAVYTFFFA CLIGRQFLDP TKGYVGHDLD LYVPIFTLLQ FFFYAGWLKV AEQLINPFGE 300
  301 DDDDFETNWC IDRNLQVSLL AVDEMHMSLP KMKKDIYWDD SAARPPYTLA AADYCIPSFL 360
  361 GSTIQMGLSG SNFPAEDWLW NYEKHGNRHS VMRRVKRFLS THEHPGSPRR RRSFGRQASD 420
  421 SSMFLPPSPA RDLLDVPSRN PHRGSPTRKQ SRSQEGSPKL HSSMGELSTI RETSRTSTLQ 480
  481 SLSPQSSVRS SPTKMPQVPE VLITAAEAPA FSADSHQHDS TTSILSLEFT GVQPSGTEQQ 540
  541 VEPSGTPPGD PNPQTTSAST ERDLFKFEED LEDDRFPKRW SLPEFLESRH TSLGNLGPDP 600
  601 VSPRDALLLP DTETPSETNG IHPGAGSALA PDILYLMESL DKETDILEFN NEHTGESPKG 660
  661 TPQRPRTWF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle