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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LRK64_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRAKSMVSL LLVLFLVRAH VATTETTTEF IFHGFKGNQS EIHMQGDSTI TSNGLLRLTD  60
   61 RNSDVVGTAF YHKPVRLLDS NSTNTTVRSF STSFIFIIPS SSTSNGGFGF TFTLSPTPNR 120
  121 TDADPEQYMG LLNERNDGNS SNHVFAVEFD TVQGFKDGTN RIGNHIGLNF NSLSSDVQEP 180
  181 VAYFNNNDSQ KEEFQLVSGE PIQVFLDYHG PTKTLNLTVY PTRLGYKPRI PLISREVPKL 240
  241 SDIVVDEMFV GFTAATGRHG QSSAHYVMGW SFASGGEHPL AAMLDISQLP PPPPNKAKKR 300
  301 GYNGKVIALI VALSTVISIM LVLLFLFMMY KKRMQQEEIL EDWEIDHPHR FRYRDLYKAT 360
  361 EGFKENRVVG TGGFGIVYRG NIRSSSDQIA VKKITPNSMQ GVREFVAEIE SLGRLRHKNL 420
  421 VNLQGWCKHR NDLLLIYDYI PNGSLDSLLY SKPRRSGAVL SWNARFQIAK GIASGLLYLH 480
  481 EEWEQIVIHR DVKPSNVLID SDMNPRLGDF GLARLYERGS QSCTTVVVGT IGYMAPELAR 540
  541 NGNSSSASDV FAFGVLLLEI VSGRKPTDSG TFFIADWVME LQASGEILSA IDPRLGSGYD 600
  601 EGEARLALAV GLLCCHHKPE SRPLMRMVLR YLNRDEDVPE IHDNWGYSDS SRTDLGSKLV 660
  661 GYISSDRASS SHSHTSSSLT RISSTSLISG R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle