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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|240255969, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.28
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCDSHGNLS DTEFSKPLPS IGVYVAAASL ICGVAMFSDL LHGFRHRKFW FPCKFFSLNA  60
   61 TTLTFISVCV KLSLDLNTSM PSRQDQLAKL SSSVFVCTVM ANSMPSLGYM VTQDLLMNLT 120
  121 ALGILVITDV VNICIQLGTG AIYVFPQEHA LVIILMLLMF MILSFSAITV PATKRFLELK 180
  181 YKKRYEFALK QCPSYTERRR GVPKLKEDLM KFWMMAHTSS PQFVMARSVT CTTTGFLCFL 240
  241 IAITLAEAMV RSYFLQPRSL GFCNGDSDYK WSTTLVLVSQ TAAVAIGTVA PASRWLKAVN 300
  301 FRCPFRNKKS LKDELRVESY WVECLAEKKE RPLNFWMLHG RCSRKLAHDL NRLMLDICIA 360
  361 TQYGIVLASK FLRFITVYCS SRILLCCFHF TFKSDSVANA ESSGSNPSTR QFVLHLEGEE 420
  421 EMVDYMARSN RVATDHLIQK GRKKQPVNLI ELLEATTFIS KGFEGIRDFD SDEVSSLASG 480
  481 EPPNSWALPL VTLTSIAVAL PNIKPCSLKK LVKAVNEALV YVNKFEEVLD IEGELANSRK 540
  541 AAEVVWLGVD LYHKWLNVDL RKLSKQHSKT PQEVLKELVD IAQKEFTESW EKNRILCMKH 600
  601 KPSHWPIKTQ AANSMYRISQ TLLMKYESRN IETEETLLKD VEKMVSDIVS GCFCNTAQVI 660
  661 GMKCLVTAVE VREASVREAA MHLGRTEKIL EIVDRRCMPA LSHHKVAKID EWREFYRTNK 720
  721 SITFTHPSSQ CTTRELIINL E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle