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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6562743, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLNIFVLLV NINLLLCAQV KNFHKQKNIH CYVLPYAKKN IYPCKTKVLK KNNYLSIKNG  60
   61 KSKKYGCNEL FRQKGDELDE YKDNKIDDEK NDNKSNDKRN DEKNDNKTND KRNDEKNDNK 120
  121 TNDKRNDEKN DNKTNDKMKD EKNDNKTNDK MKDEKNDNKT NDKMKDEKNN NERNDKMKDE 180
  181 KNDNKTKDKI NDDIYETFDE YFNKRAEENY TKLEGEKLKI LKENIHTNKD EIRNVLKKTY 240
  241 KNEYNKLIKE DQEDEEVSQA VYENIKITFL MKENINNFLF TQYSYMINKL KEKSVIIKNL 300
  301 KKFYNQNVNP GGDSVHQNED ATKTNNVTDK DNRTHIDDSN QNNNINYHED IHNKNYINNH 360
  361 EETLLKDQLN NIRKPFYHNK FVDKYYPNNN SKYKEENKSK DHIKNIIENV SFFKPEQNYE 420
  421 QTKNCRTFSD QIFANVKIEG EHILNNLRKG NEQDKNNNNN NNNKFTQDDI MTNDNEGEES 480
  481 TSLFLKNNVC PLQLLKDNVK TFLNYKKENI IKSNIHEDLL YGRVKVHWFP KFMKRVITKI 540
  541 PDYIKVSDII IEVRNGIIPF VFDDLFALNI FDIHTNKPHI IVYTNSDKSS TKANEEWGNY 600
  601 YRRKLFWYDK NFNKNINKKY LNQMKKSAVI FLDAKNGKKE IIVLKKLINR LCYHIIEKKK 660
  661 KKGIHNYKVK CIFIGLPNVG KSALINRILE IKKAKSYDNP GLTTNIQMYS NKKYELIDTP 720
  721 GILAQNLYKI KEKNFNKNNI ILDHIYNHNS NNHSLDNVVS IKNYNNYMHV ENNIYLLALC 780
  781 NHISPKMYDV YNIAETLMQN IYDAYQYDND YVDLQKIIKR YQINFNECLN SQGNFSPYHF 840
  841 IQKLARDKCH NDINQAAMRL VTDFRKNYLG RTTLNYPLYF NKKSITLKQY KHFQNQKSDK 900
  901 YIGW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle