YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|48892684, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHITKLTVG LITIALVSCN KYESQISTDV STKISRPDPI ITPRQDNAPF NQIYIYRLAE  60
   61 NITVEVVARS TVSGGDPFSS SGSGVIIGKQ GSTYYVLTAK HIFQYQDDYR VVVRSKKPGE 120
  121 DAEILKLEII YRYPDADLAV FKFASVKQYK VAEVGEASQL RKNSEVYVGG WPGAENREGF 180
  181 QFTPAKVTNP RAGDLLNYEP TVPGEGVYPG MSGGAVLNKA GQLMGIHVGL TKAGDGEGVL 240
  241 VSTFLRDIPQ QVSRVLVRST SAALPSPIPS PKNRAVGNTD NVTPSQIQNA ESYYEQGDKH 300
  301 HDREEFEQAL ADYNQAIQLN PKYADAYNNR GIVYRKQGKY DLALADLNQA IQLNPKYADA 360
  361 YKNRGNVYYN QGKYDLALAD YNQAIQLNPK YAEAYNNRGL VYDDQGKYDL AIAEFNQAIQ 420
  421 LNPKYAYAYN NRGVVYDDQG KYDLALADYN QAIQLNPKYA EAYNNRGGVY LEQGKYDLAI 480
  481 ADYNQAIQLN PKLAEAYNNR GAVYRKQGKY DLALADYNES IRLNNPQLWL PYNNRGLVYN 540
  541 DQRKYDLALA DYSQAIQLNP KDAYAYYNRG NVYDDQGKYD LAIADYSQAI QLNPKYANAY 600
  601 YTRGLTNKDQ RNMEKAISDF EKAADLYKQQ GNQTWYQNSL DQLKELRGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle