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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113477255, gi...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYSETSEQY YISEDVKKRI QEAKYQKLKW LYLSGCKLTE VPGDVWELEQ LEVLDLGSNE  60
   61 LTSLPESIGK LSNLTSLYLV NNKLTSLPES ITKLSNLTEL YLDGNQLTSL PESITKLSNL 120
  121 TELYLSVNKL TSLPESIGKL SNLTSLDLGG NQLTSLPESI TKLSNLTELY LGHNQLTSLP 180
  181 ESITKLSNLT ELYLGHNQLT SLPESITKLS NLTSLDLSWN KLTSLPESIT KLSNLTSLYL 240
  241 GSNQLTSLPE SITTLSNLTV LDLGSNQLTS MPESITKLSN LTELYLDGNQ LTRLPESITK 300
  301 LSNLTKLDLR NNQLTRLPES ITKLSNLTKL NLSWNKLTSL PESIGKLSNL TSLYLRDNQL 360
  361 TILPESITTL SNLGWLYLNN NPLENPPIEI ATKGIQEIRD YFQQEREKGI DYIYEAKLLI 420
  421 VGEGGAGKTT LANKILDQNY QLKDEDTTKG IEVHQYKFQT KNQNDFQINI WDFGGQEIYH 480
  481 ATHQFFLTKR SLYTLVADTR KEDTDFYYWL NVVELLSGNS PLLIVKNEKQ ERKREINQRA 540
  541 LQGQFTNIKE VLATNLKTNR GLEEIIREIE HHISKLPHVG SRLPKTWKQV REILELDSRN 600
  601 YISLEEYLSI CEQNGFEKRE YKLQLSGYLH DLGICLHFQD DPLLNKTVIL KPEWGTAAVY 660
  661 KALDNQTVRN NFGEFTKDDL ANIWNEEKYV NMRDELLQLM IRFKLCYKIY GNSQTYIAPQ 720
  721 LLTENQPEYD WDESNNLILR YTYEFLPKGI ITQFIVAMHK DIEEQKYVWK SGVILKKNET 780
  781 RAEVIEYYNI REIKIRVSGR EKQYLMTIVT YEFDKIHSSY NNRLKYNQLI PCNCNVCQNN 840
  841 QNPTSYKFEI LKNRINNGKE TIECDYPPFY EVNIKSLIDD VINISEYDKL SQSNSHPNNV 900
  901 YNKYYSYTNY GGDWNIDAKD TNSQIMGNKT MNKNIDKSRK IENKDGNITG NVLGDESNIE 960
  961 GNITTHSPAP KTEKPDKFGW LDFLTWAQNG QMIFYLASAT IGIFVLIIYP KLFPSGFPKL1020
 1021 IEKVQEIFPA PQEEIESEQN Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle