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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CTSR2_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHERGHLQL PRADAIRSKL IDTFSLIEHL QGLSQAVPRH TLREILDPAC QKKLMLGDQE  60
   61 QLVRFSIRAR RMGHITHAQR LLSRLRVRCG GRPPLSLWAG WVLDSSIFSN FIISLIFLNT 120
  121 FVLMVEIELM NSTNTSLWPL KLALEVTDWF ILLSFIVEIL LMWLASFFLF WKNAWSVFDF 180
  181 VVTMLSLLPE FVVLIGVSAD SVWLQLLRVS RVLRSLKLFA RFPQIKVILL ALVRALKSMT 240
  241 FLLMLLLIFF YVFAVAGVYF FKEYSRSTIE NLEYNMFFSD LLNSLVTVFI LFTLDHWYAV 300
  301 LQDVWKVPEA SRVFSSIYVI LWLLLGSIIF RNIIVAMMVT NFQNIRNELH EEMTHLEVQY 360
  361 KADIFKRRII QRRQQSESLR GTSQGKVSED ITETSEATDE EKSEAEESEE EKSEEEKSDV 420
  421 EKSDEEKNDE EKSDEEENDE EKSDVEKSDE EKNDEEKGYT EKVYSGRTFV ERSYAERSFA 480
  481 GKAENEKVQK ELKEKAYPGS PPNSSSHDEA FAADDTYLEN LDWETLVHEN LPGLMDMDQD 540
  541 DRVVWPRDSL FRYFELLESL QYNLEERKRL QEFAVQALMN FEDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle