YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MMT2
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRISIDSIK QFGSFVPGYN NTSYHAAGRA IRTSSLYSTM ISANPRRCLH SSKLLNKEGQ  60
   61 EEGYNEQLIS KMSSQNGSNS RQNESEGKKE GKASSVKSLL QHTHSHSHTH MHDNPLLSLN 120
  121 VQQIKKNPGV RITWIGLASN VGMAVGKFVG GITFHSQALL ADSVHALSDL VSDFLTLFSV 180
  181 QYASRKPTSE YPYGYGKVET VGSLAVSTIL AMAGISIGWS SLCAIVGPVI PHAILESMAG 240
  241 LIGETHSHSQ SLTQQATNVN AVWIAAGSIL VKEWVFQATK KVAIQTNSNV LMANAWHHRV 300
  301 DSLTSLVALV AITSSYFFNI QSLDNLGGLV VSGLIIKTGG QGILSSLKEL VDQSIPPTDP 360
  361 RYLEIESVIK DSIGSLKTDL DLKQSLHVRD LTILASGPNL RATTTLEVPV LHSGQEVGIR 420
  421 FLENAISTIR EDLRMKVPNV GKVDVEFVDV TSDSKGDLEH SHDTKSTNHT HTHSDSADTH 480
  481 THKH

Type	Start	End	Confidence
Cytoplasmic	1	131	0.92
Transmembrane Helix	132	154	0.69
Non-Cytoplasmic	155	203	0.61
Transmembrane Helix	204	230	0.75
Cytoplasmic	231	299	0.56
Transmembrane Helix	300	318	0.63
Non-Cytoplasmic	319	484	0.59