YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YDR541C
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNTVLVSGA SGFIALHILS QLLKQDYKVI GTVRSHEKEA KLLRQFQHNP NLTLEIVPDI  60
   61 SHPNAFDKVL QKRGREIRYV LHTASPFHYD TTEYEKDLLI PALEGTKNIL NSIKKYAADT 120
  121 VERVVVTSSC TAIITLAKMD DPSVVFTEES WNEATWESCQ IDGINAYFAS KKFAEKAAWE 180
  181 FTKENEDHIK FKLTTVNPSL LFGPQLFDED VHGHLNTSCE MINGLIHTPV NASVPDFHSI 240
  241 FIDVRDVALA HLYAFQKENT AGKRLVVTNG KFGNQDILDI LNEDFPQLRG LIPLGKPGTG 300
  301 DQVIDRGSTT DNSATRKILG FEFRSLHESV HDTAAQILKK QNRL

Type	Start	End	Confidence
Signal Peptide	1	20	0.89
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	344	0.99