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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SIM1
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSTAVTTL ISSGAIVSAL PHVDVHQEDA HQHKRAVAYK YVYETVVVDS DGHTVTPAAS  60
   61 EVATAATSAI ITTSVLAPTS SAAAADSSAS IAVSSAALAK NEKISDAAAS ATASTSQGAS 120
  121 SSSSSSSATS TLESSSVSSS SEEAAPTSTV VSTSSATQSS ASSATKSSTS STSPSTSTST 180
  181 STSSTSSSSS SSSSSSSSSS GSGSIYGDLA DFSGPSEKFQ DGTIPCDKFP SGQGVISIDW 240
  241 IGEGGWSGVE NTDTSTGGSC KEGSYCSYSC QPGMSKTQWP SDQPSDGRSV GGLLCKNGYL 300
  301 YRSNTDADYL CEWGVEAAYV VSKLSKGVAI CRTDYPGTEN MVIPTYVEGG SSLPLTVVDQ 360
  361 DTYFTWEGKK TSAQYYVNNA GVSVEDGCIW GTSGSGIGNW APLNFGAGST GGVTYLSLIP 420
  421 NPNNSDALNY NVKIVAADDS SNVIGECVYE NGEFSGGADG CTVSVTSGKA HFVLYN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle