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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47557068, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILFLLLFLL LLARFFYIQA TGTVHNQDLD TLAKQKHSKT GVLEANRGTI YDQNGHVLAQ  60
   61 DANSYKLVAE LKGAKPVENK EDTAKKIAGV LGKDEAKILA TLNKEGRSQV EFGNLGKGLT 120
  121 KEQKEQIEAL KLPGISFITE NARVYPNGDF ASYVVGHARP DDKGIAIGQF GLEKSLDKYL 180
  181 GAANGKVAYT GDRRGVSLDG GKVNVKAPKN GDNVYLTLDQ RIQSYLEDAM KEASKHYEPE 240
  241 SLIGIVADPK TGKILAMSSK PSYDPNQENN KYFYNDAIAN AFEPGSTMKI FTLAAAINEG 300
  301 VYKGQDYYQS GTYQVGNRKI KDHNGGAGWG SITFDEGVER SSNVAFAILG DQKLGPDRFR 360
  361 KYIHAFGLDE KTNIDLPGEG SNTIVFDQQI QQVTTAFGQG STVTPIQLVQ AATAIANDGK 420
  421 MMKPYTIDKI VDPITGEVKL EHKPEEVGKP VTKETAAQVR QLLERVVTSP KGTGTAYKVD 480
  481 GYSVGGKTGT AQIPDGKGGY MTGRENYIFS FLGMAPMDDP QLVVYLAVKQ PKLKDDEGGA 540
  541 QPLADIFKYV TKNSLEYLKI KPNEVKDPKK YVKEQQTAVP DVTEKTMEEA KKAIDKAKLR 600
  601 PIVLGEGKVQ QQVPKATEQT LKGDRVFLVG DKPTMPNIQG WALRDVMNLA KTLKLNLKPT 660
  661 GTGYVTEQSV PEGTLLQPGT ELGVTLVPPL EPQQEAEKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle