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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y1063_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISSSSCMFF LVFAFFLISP VRSSDVEALL SLKSSIDPSN SIPWRGTDPC NWEGVKKCMK  60
   61 GRVSKLVLEN LNLSGSLNGK SLNQLDQLRV LSFKGNSLSG SIPNLSGLVN LKSLYLNDNN 120
  121 FSGEFPESLT SLHRLKTVVL SRNRFSGKIP SSLLRLSRLY TFYVQDNLFS GSIPPLNQAT 180
  181 LRFFNVSNNQ LSGHIPPTQA LNRFNESSFT DNIALCGDQI QNSCNDTTGI TSTPSAKPAI 240
  241 PVAKTRSRTK LIGIISGSIC GGILILLLTF LLICLLWRRK RSKSKREERR SKRVAESKEA 300
  301 KTAETEEGTS DQKNKRFSWE KESEEGSVGT LVFLGRDITV VRYTMDDLLK ASAETLGRGT 360
  361 LGSTYKAVME SGFIITVKRL KDAGFPRMDE FKRHIEILGR LKHPNLVPLR AYFQAKEECL 420
  421 LVYDYFPNGS LFSLIHGSKV SGSGKPLHWT SCLKIAEDLA MGLVYIHQNP GLTHGNLKSS 480
  481 NVLLGPDFES CLTDYGLSDL HDPYSIEDTS AASLFYKAPE CRDLRKASTQ PADVYSFGVL 540
  541 LLELLTGRTS FKDLVHKYGS DISTWVRAVR EEETEVSEEL NASEEKLQAL LTIATACVAV 600
  601 KPENRPAMRE VLKMVKDARA EAALFSFNSS DHSPGRWSDT IQSLPREDHM SI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle