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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AMO_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEPSFARLF LLFFSFLLIF ATYSWVFGPD SGFLFGTRVR KTLGSNRQVH VDHSLEKPHH  60
   61 PLDPLTVREI NRVRTILSNH DPGFGSGSAT IHSMALDEPE KSRVVQWKKG NKLLSRRAAV 120
  121 VAYWGGQTHE ITVDLDSGRV VSDVINRTSG YPILTLNDVF AASQVPLKSL EFNRSIEARG 180
  181 VKFSDLACIT PFAGWFGSEE EGRRVIRVQC FTLQGTTNYF MRPLEGLYVT VDLDKLEVIK 240
  241 IIDKGPIPIP KASGTEYRFG VQNKPVHMDR INPISMEQPD GPSFRVEDGH LVKWANWVFH 300
  301 VKADQRAGMI ISQATVRDSE TGEPRSVMYK GFPSELFVPY MDPEEGWYYK GYMDAGELGL 360
  361 GPTAMPLVPL NDCPRNSYYI DGVFASPDGK PIVQPNMICL FERYAGDISW RHSEILFANA 420
  421 DIRESRPKVT LVARMATSVG NYDYIFDWEF QTDGLIRVTV AASGMLMVKG TPYDNVDDLG 480
  481 DREDDAGPLI SENVIGVVHD HFITFHLDMD IDGPMNNSLV KVHLEKQRVP TGKSPRKSYL 540
  541 KVKKYIAKTE KDAQIKLSLY DPYEFHIVNP NRKSRVGNPA GYRIVPGGNA ASLLDHDDPP 600
  601 QIRGAFTNNQ IWVTPYNRSE QYAGGVLIYQ SQGDDTLQVW SDRDRSIENK DIVLWYTLGF 660
  661 HHVPCQEDYP VMPTVAASFE LKPANFFESN PILGSAPFFE KDLPVCRPFA SS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle