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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: APA2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVYSRAVAF SVFVSFLLFF TAYSKRNDGT FRVGLKKLKL DPNNRLATRF GSKQEEALRS  60
   61 SLRSYNNNLG GDSGDADIVP LKNYLDAQYY GEIAIGTPPQ KFTVIFDTGS SNLWVPSGKC 120
  121 FFSLSCYFHA KYKSSRSSTY KKSGKRAAIH YGSGSISGFF SYDAVTVGDL VVKDQEFIET 180
  181 TSEPGLTFLV AKFDGLLGLG FQEIAVGNAT PVWYNMLKQG LIKRPVFSFW LNRDPKSEEG 240
  241 GEIVFGGVDP KHFRGEHTFV PVTQRGYWQF DMGEVLIAGE STGYCGSGCS AIADSGTSLL 300
  301 AGPTAVVAMI NKAIGASGVV SQQCKTVVDQ YGQTILDLLL AETQPKKICS QIGLCAYDGT 360
  361 HGVSMGIESV VDKENTRSSS GLRDAGCPAC EMAVVWIQSQ LRQNMTQERI VNYINEICER 420
  421 MPSPNGESAV DCSQLSKMPT VSFTIGGKVF DLAPEEYVLK IGEGPVAQCI SGFTALDIPP 480
  481 PRGPLWILGD VFMGKYHTVF DFGNEQVGFA EAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle