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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PPA24_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVLGVLLC LLALFSSSLC LDHANGRGDQ ALAQINVYET SLALDSSVKL HASPQVLGSQ  60
   61 GEDTEWVNLA ISNPKPTSDD WIGVFSPAKF DSGNCWPTSG GKEKTPYICS SPIKYMYCNS 120
  121 HPDYMKSGNV TLKFQIINQR ADVSFALFSN GVQEPHLLGV SNPVAFFNPK APVYPRLALG 180
  181 KNWDEMTVTW TSGYNIDEAV PFIEWSAKGL PARRSPAGTL TFNRNSMCGN PARGVGWRDP 240
  241 GFFHTSFLKE LWPNREYIYR LGHDLVNGST IWSKNYTFVS SPYPGQDSKQ RVIIFGDMGK 300
  301 GERDGSNEYN DYQPGSLNTT DQVIKDLKDI DIVFHIGDLT YSNGYLSQWD QFTAQVQPIA 360
  361 STVPYMIASG NHERDWPDTG SFYAGTDSGG ECGVPAETMF YFPAENRAKF WYKTDYGMFR 420
  421 FCVADSEHDW REGTEQYKFI ENCLATVDRK TQPWLIFIAH RVLGYSTNDW YGKEGTFEEP 480
  481 MGRESLQKLW QKYKVDLAFY GHVHNYERTC PIYESQCVNN DKDHYSGTFK GTIHVVVGGA 540
  541 GSHLSPFSSL VPKWSLVRDY DFGFVKLTAS DHSSLLFEYK KSSTGQVYDS FNISRDYRDV 600
  601 LACTHDSCEP TTSAG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle