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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49073196, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.81
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLASRSIRAF AAPMRTSAIA TRSLQTAPTR PRSLLASPTM SSSPLVAGAV PAQAGRRNLF  60
   61 TRAPPTPLAR TKQLIYLVFA IAAGTLGIAY YADSRSAIHR WIAVPALKAF LDPESAQKLA 120
  121 VKMLETGLAP RDLVDDDAVL ETELFGRKLS NPIGLAAGFD KQAEAIDGLL DLGFGFIEIG 180
  181 SVTPEPQPGN PQPRYFRLIE DNACINRFGF NSEGHNVILS RLRDRIRRWL LHSSSVANLQ 240
  241 DALLASPDSA SVNARQLIAT HPKSTSAFVD ATDLPRSLRP AKMLGINLGK NKTSNEESVD 300
  301 DYVKGVERLG PYADMIIVNV SSPNTPGLRR LQRRGVLEDL LTQVVRARDG MVESHLRFSD 360
  361 KKVAVPLLVK IAPDLSEEEL HDVADAALKS GIDGLVISNT TISRPASLRS SEHVRETGGL 420
  421 SGAPVKPLAL KALTTVHKRL QGKLPIIGCG GISNGQDALD YAKAGASAIE LYTSFGYQGV 480
  481 GLPRRLKDEL VELLKAEGKT WQQVVGSGLD LTKISIATPN AETPTGLHPG SDAAFQKSVA 540
  541 GVKLELNGLR NKLGLNPTLT KENLRSFLPS RESDASYYDL IEKAHSALGL EFAAGENSNV 600
  601 SAPSSTAPSS QPLPTAGERH VQTANQLLQD PQVPTVTVVT NDKTKKVFGE TTSGKVLEAN 660
  661 ENAANRDFAK IDKIQSCLIC SLESLRMSAA AAAAAAAAAA LCCGGGAGLC DGLMLLSMSC 720
  721 EKSFNVIGCI GPSGLEAMSR ERSCSGARSF ICIFNYAQGS FGFSFDYASA ICVLAIGVPP 780
  781 IDRGAASHYL SLQRIASIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle