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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49077844, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKARLFAARP FYSVVSATIT NDSLGAIRQV KLKYRGRVST LHDYESRIAT TITDWRRIIS  60
   61 KVASGCVKCD VTALHIRAYA FTIDALLGSS PERTDYQVER SQSVDFAPSD CNARAPQTRR 120
  121 PASLDRPATL RLVEKRLASR RVGINASSVQ HMGLLLWPIF NETHRVDPFT QPGLVAWPDA 180
  181 GHDQVTSHDH ERVTRVTSDE SVMLSFELTL MTRTSSQVES STKHKAQSTK HKAQSTEHRA 240
  241 QAREIQNQIP LVTVTRRWER ILFGIQTSVG TSFSTPSSHH VLASLSLHIG RACRLLENGT 300
  301 QHCMFKTFAR CLSFVPKTVP LTFSRSARRW PAPTYKCFVP ISIRSMSSTD APNQPGVEAV 360
  361 NLVKDELTGE MISKSELKRR LKLREKEAKK AAKAAEAPAQ PTTAAVKSAA AAEEELNPNQ 420
  421 YYERRFRTIS ALRESKNPDP YPHKFHVSIS LSEFISKYEG KLEAGQHLDQ EEVSIAGRLH 480
  481 NMRSSGQKLR FYDLHGEGVK VQVTAQLQDH TDGDFFAIHE LLRRGDVVGV TGVPGKTKKG 540
  541 ELSIFPSSIK LLSPSLKMLP KASQGDKGGF TDTEQRHRKR YLDLIMNNHV RDIFVKRAKI 600
  601 INYVRRFLDN LGFLEVETPM MNQIAGGATA KPFVTYHNDL KLDLFMRIAP ELFLKELVVG 660
  661 GLDRVYEIGR VFRNESIDQT HNPEFSICEF YMAYADMYDL MDITESMISG LVKAVTGSYK 720
  721 IKYHPDGKDV EGGREYEIDF STPWKRFDMI KELEAAMNVR FPPADQLHTE ETRKWLSDLA 780
  781 AKHNVDCSEP RTSSRLIDKM TGEFIETQCI NPSFIVGHPQ VMSPLAKRHR DIPGLCERFE 840
  841 VFVATKEICN AYTELNDPWV QRANFEEQSR QKDQGDDEAQ GIDHVFIDAL EHGLPPTGGW 900
  901 GLGIDRLVMF LTDSNSIKEV LAFPANKPLP TDNKPAPIPD TLPHPNS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle