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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SEY1_USTMA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.79
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVQSRAQGS LGAVCGVSLF LAPRSERREQ SGEQSRLIQA DSRPPHPCAS GSREFTINSD  60
   61 CLPRRQKMEL NVDSAKQLLA EHEQELQSAH DAHSILLASQ PITAATTHPN ATASNAARAV 120
  121 PVVAPSSVPT PTAASTPFIS TQPPAPAQTG RMQLIDEQQK FNSADFSPHL ENWGLADAGF 180
  181 GYDLCAVLGS QSTGKSTLLN KLFGTNFDVM SESARQQTTK GIWMCKGLKM NVLVMDVEGT 240
  241 DGRERGEDQD FERKSALFSM ASAEVLIVNL WEHQVGLYQG ANMGLLKTVF EVNLGLFQAS 300
  301 RAKTAGAKDK TLLLFVIRDH IGVTPLENLS ATIMADLTKI WHSLSKPQGL ELSKITDFFD 360
  361 FMFTTLPHKI LQPAEFDKAV DVLRNRFVNP KDPNFVFKTE YHKRIPADGL AHYLESIWEQ 420
  421 VMTNKDLDLP TQQELLAQFR CDEIANVAFA HFATSIKDFR KHIEGGSVVE SLGADMALHR 480
  481 STALSKFDRD ASRYHQEVYK RKRIDLLDKL NGSLSPFFLG QLKNLHRLML QSFKQAVLDR 540
  541 MRTEPNYDFG EVVSSEKRTA LAKFSAAAQA VLLTDTDWTI DDEVVELDVE IQSISDTMRV 600
  601 EETKKMVAQI ERTFNKNIGE PVELALKSAK RSMWDEVLIS FSTLLEQAEA TYVRKATSFN 660
  661 CTDDENEHAL LALRRKSWMS MRAKVDEQTA DSVIAAKLRN SFEDGFRYDD AGVPRVWKPE 720
  721 DDMDGAFRKA RDETLELIAL YAKIQAVDTT LMRELRSKFE DAEPVGLVVE DEAFDWHATL 780
  781 SVLSETRKND IGMRFRKEAD AMYVEAKRAT VSSIAQVPLW MYGVMLVLGW NELMAILSSP 840
  841 VYFAFLLVLI ASAYIVWRLN LSGPLISVLR AVANEVHRLA DAQLRTHFSQ PLREPRPPAE 900
  901 SRPAEQIELE PN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle