YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49067667, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPSKINTEL CPVYAPFFGA MGCTAAIVFT CLGASYGTSK SGVGISAMGV LRPDLLIKCV  60
   61 IPVIMAGIIA IYGLVVSVLI SGDIKTPMSL YAGFIQLGAG LSVGLAGLAA GFAIGIVGDA 120
  121 GVRGTAQQPR LFIGMILILI FAEVLGLYGL IVALILNTRS QDDPLGCLLK

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.69
Transmembrane Helix	14	38	0.86
Cytoplasmic	39	54	0.68
Transmembrane Helix	55	80	0.85
Non-Cytoplasmic	81	93	0.64
Transmembrane Helix	94	118	0.86
Cytoplasmic	119	130	0.63
Transmembrane Helix	131	155	0.89
Non-Cytoplasmic	156	170	0.70