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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50777724
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKHPYSIYP FQMPPHCATS DNWEFKKLLQ KCAPLLTALE QGCVIHIAAS PCGWGIPWGL  60
   61 LKQDGIVDPS QYVGSFMVEE LELQQHVGQL EEQLRALKDC PRRRSVVLRF SLQGLKVYGD 120
  121 DGEPSTCSQA RAELCSCHGP SKALLLLQTL LMAHALRRIL YSTCLHAERQ FAFVARNPHS 180
  181 PPSTLFCHLF VSPVGEVHVL HLLLCRSFQL CYLQAHPELQ AAEPDPPVLL RETLNPEEVS 240
  241 RNVNALLSLR RLPALGPLGA GHAESIRFLV RAFCLEIYGE DIQDLLGADT KQKTTCEGKA 300
  301 VGAAPRASRK HYDPHPLFPI SSDTGFHDDC GWHQELKEHL EKVLCMEGLS LHPVHSVVQC 360
  361 EQIVEAVWRN TVMNKDSSCS VFTICMEICT DSAVPQAVRG HGNRNAGAEE AVIADGTSAP 420
  421 VDQQQLLADV SAKRASSSGV QCTLSERAQA TPGSGFLLLV LQMLEQQVVG WEEAENEDLN 480
  481 EDEEKHKRQK FADEQRMQLV TVLQKSDNDS SDLVLLNIYD SVQEELLDQV QSLIQRDCNY 540
  541 SNLEKIKCES VWDEESGCWK ISEPGIQKNH LPAAIRFLSG SRTTFIAVPE SYRWVRSPQQ 600
  601 TSDAHLHTNP ARGGTAWRLR SFPMPRADEK MAAAEVRLWW LLAAVAAVGA GPRSLVLLEN 660
  661 GNLRDTHSLF FRSLADRGFE LTFRTADDAG LSLIKYGEFL YDNLIIFSPS IEDFGGNINV 720
  721 ETITAFIDGG GSVLVAASSD IGDPLRELGS ECGIEFDEER TAVIDHHNYD ISDPGQHTLI 780
  781 VADAENLLKA PTIVGKKALN PILFRGVGMV ADPDNPLVLD ILTGSSTSYS FFPDKPITQY 840
  841 PHAVGKNTLL IAGLQARNNA RVVFSGSLDF FSDAFFSSAV QKATPGSKRY SQTGNYELAV 900
  901 ALSRWVFKEE GVLRVGAVSH HRVGELAPPN AYTVTDLVEY SIVIEKLSDG KWIPFDGDDI 960
  961 QLEFVRIDPF VRTFLKRNGG KYSVQFKLPD VYGVFQFKVD YNRLGYTHLY SSTQVSVRPL1020
 1021 QHTQYERFIP SAYPYYAGAF SMMVGLFMFS IVFLHMKEKE KSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle