YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TBL3_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLIPNRGV GGTKIPLSII VLVLCGFMFF ILLYTERISL LSSSSSSSSS FFKLKSCPRK  60
   61 DVSSKPKEKI RKERSEILEV LDDRFEFDPE ECNVAAGKWV YNSSIEPLYT DRSCPYIDRQ 120
  121 FSCMKNGQPE TDYLRWEWQP DDCTIPRFSP KLAMNKLRGK RLLFVGDSLQ RSQWESFVCL 180
  181 VESIIPEGEK SMKRSQKYFV FKAKEYNATI EFYWAPYIVE SNTDIPVISD PKKRIVKVDS 240
  241 VKDRAKFWEG ADILVFNTYV WWMSGLRMKA LWGSFGNGES GAEALDTQVA YRLGLKTWAN 300
  301 WVDSTVDPNK TRVFFTTMSP THTRSADWGK PNGTKCFNET KPIKDKKFWG TGSNKQMMKV 360
  361 VSSVIKHMTT HVTVINITQL SEYRIDAHTS VYTETGGKIL TAEQRADPMH HADCIHWCLP 420
  421 GLPDTWNRIL LAHL

Type	Start	End	Confidence
Cytoplasmic	1	14	0.88
Transmembrane Helix	15	35	0.93
Non-Cytoplasmic	36	434	0.98