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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50756017
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSAWLFLSK IYNGIKKKCI QQPYISTCHS GTTAATCSRD QRQEKQFSKL RQEKASNIDN  60
   61 GNSDSWAPVW KDDEMQSIPR EVSHKQHPAQ KQREAESFWI REQPCGHCKA ERLQQWLHQH 120
  121 FIKPSEKNSS LDEDVWQTES PFTSTMKLIL IFSALFGAAL CLETFVGHQV LRIKTRNEEQ 180
  181 LKKLRFLETL DHLELDFWLN PSTPALPVDV RIPAHSLQAV KIFLESHGIE YSILIEDLQV 240
  241 ILDREKQDIV AGQQMERSSS TFNYGTYHSL ASIYQELDNL ASEYGNIVSK IQIGESYEKR 300
  301 PLYVLKFSTG RGNHPAIWLD AGIHSREWVT QASAMWIAKK IASDYGNDPS ITSLLNNLDI 360
  361 FLLPVANPDG YEFTHTTNRM WRKTRSKNSG SLCIGVDPNR NWDAGFGGPG ASSNPCSDSY 420
  421 RGPRANSEVE VKSVVDFIKN HGNIQAFLTL HSYSQLLMYP YGYKCTPPAD NTELNTIGKA 480
  481 AANSIQSLYG TTYTVGSICS TIYQASGGSI DWSYDYGIKY SFAFELRDTG RYGFLLPAAQ 540
  541 IIPTAEETWL GLKTIMEYVR DNPY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle