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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT4C_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLAASTCL YSWLLVLLLS SVSAIIDEDT QVYIVYMGSL SSRADYIPTS DHMSILQQVT  60
   61 GESSIEGRLV RSYKRSFNGF AARLTESERT LIAEIEGVVS VFPNKILQLH TTTSWDFMGV 120
  121 KEGKNTKRNL AIESDTIIGV IDTGIWPESK SFSDKGFGPP PKKWKGVCSG GKNFTCNNKL 180
  181 IGARDYTSEG TRDTSGHGTH TASTAAGNAV KDTSFFGIGN GTVRGGVPAS RIAAYKVCTD 240
  241 SGCSSEALLS SFDDAIADGV DLITISIGFQ FPSIFEDDPI AIGAFHAMAK GILTVSSAGN 300
  301 SGPKPTTVSH VAPWIFTVAA STTNRGFITK VVLGNGKTLA GRSVNAFDMK GKKYPLVYGK 360
  361 SAASSACDAK TAALCAPACL NKSRVKGKIL VCGGPSGYKI AKSVGAIAII DKSPRPDVAF 420
  421 THHLPASGLK AKDFKSLVSY IESQDSPQAA VLKTETIFNR TSPVIASFSS RGPNTIAVDI 480
  481 LKPDITAPGV EILAAFSPNG EPSEDDTRRV KYSVFSGTSM ACPHVAGVAA YVKTFYPRWS 540
  541 PSMIQSAIMT TAWPVKAKGR GIASTEFAYG AGHVDPMAAL NPGLVYELDK ADHIAFLCGM 600
  601 NYTSKTLKII SGDTVKCSKK NKILPRNLNY PSMSAKLSGT DSTFSVTFNR TLTNVGTPNS 660
  661 TYKSKVVAGH GSKLSIKVTP SVLYFKTVNE KQSFSVTVTG SDVDSEVPSS ANLIWSDGTH 720
  721 NVRSPIVVYI MVVDEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle