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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT36_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNYRTSIYV VLSLVIFLNV QRSFVAESSA KRKVHIVYLG EKQHDDPEFV TESHHRMLWS  60
   61 LLGSKEDAND SMVYSYRHGF SGFAAKLTES QAKKIADLPD VVHVIPDSFY KLATTRTWDY 120
  121 LGLSAANPKS LLHETNMGEQ IIIGVIDTGV WPESEVFNDS GFGPVPSHWK GGCETGENFN 180
  181 SSNCNKKLIG AKYFINGFLA ENESFNSTNS LDFISPRDLD GHGTHVSTIA GGSFVPNISY 240
  241 KGLAGGTVRG GAPRAHIAMY KACWYLDDDD TTTCSSADIL KAMDEAMHDG VDVLSISLGS 300
  301 SVPLYGETDI RDGITTGAFH AVLKGITVVC SGGNSGPDSL TVTNTAPWII TVAATTLDRS 360
  361 FATPLTLGNN KVILGQAMYT GPGLGFTSLV YPENPGNSNE SFSGTCEELL FNSNRTMEGK 420
  421 VVLCFTTSPY GGAVLSAARY VKRAGGLGVI IARHPGYAIQ PCLDDFPCVA VDWELGTDIL 480
  481 LYTRSSGSPV VKIQPSKTLV GQPVGTKVAT FSSRGPNSIA PAILKPDIAA PGVSILAATT 540
  541 NTTFSDQGFI MLSGTSMAAP AISGVAALLK ALHRDWSPAA IRSAIVTTAW KTDPFGEQIF 600
  601 AEGSPPKLAD PFDYGGGLVN PEKSANPGLV YDMGLEDYVL YMCSVGYNET SISQLIGKTT 660
  661 VCSNPKPSVL DFNLPSITIP NLKDEVTITR TVTNVGPLNS VYRVTVEPPL GFQVTVTPET 720
  721 LVFNSTTKKV YFKVKVSTTH KTNTGYYFGS LTWSDSLHNV TIPLSVRTQI LQNYYDEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle