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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP29_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTRGSCCL VNALIAIAFL ATAHLCEAGL SQKEQDKVSK LPGQNFNVSF AHYSGFVATN  60
   61 EQLGRALFYW LFEAVEDAKS KPLVLWLNGG PGCSSVAYGE AEEIGPFHIK ADGKTLYLNQ 120
  121 YSWNQAANIL FLDAPVGVGY SYSNTSSDLK SNGDKRTAED SLKFLLKWVE RFPEYKGRDF 180
  181 YIVGESYAGH YIPQLSEAIV KHNQGSDKNS INLKGYMVGN GLMDDFHDRL GLFQYIWSLG 240
  241 FISDQTYSLL QLQCGFESFI HSSKQCNKIL EIADKEIGNI DQYSVFTPAC VANASQSNML 300
  301 LKKRPMTSRV SEQYDPCTEK HTTVYFNLPE VQKALHVPPG LAPSKWDTCS DVVSEHWNDS 360
  361 PSSVLNIYHE LIAAGLRIWV FSGDADAVVP VTSTRYSIDA LNLRPLSAYG PWYLDGQVGG 420
  421 WSQQYAGLNF VTVRGAGHEV PLHRPKQALA LFKAFISGTP LSTHENSISR DMSELVSDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle