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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB22G_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMEKPPLAS GLARTRSEQL YETVAADIRS PHGSMDANGV PATAPAAVGG GGTLSRKSSR  60
   61 RLMGMSPGRS SGAGTHIRKS RSAQLKLELE EVSSGAALSR ASSASLGLSF SFTGFAMPPE 120
  121 EISDSKPFSD DEMIPEDIEA GKKKPKFQAE PTLPIFLKFR DVTYKVVIKK LTSSVEKEIL 180
  181 TGISGSVNPG EVLALMGPSG SGKTTLLSLL AGRISQSSTG GSVTYNDKPY SKYLKSKIGF 240
  241 VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKKQRALD VIQELGLERC QDTMIGGAFV 300
  301 RGVSGGERKR VSIGNEIIIN PSLLLLDEPT SGLDSTTALR TILMLHDIAE AGKTVITTIH 360
  361 QPSSRLFHRF DKLILLGRGS LLYFGKSSEA LDYFSSIGCS PLIAMNPAEF LLDLANGNIN 420
  421 DISVPSELDD RVQVGNSGRE TQTGKPSPAA VHEYLVEAYE TRVAEQEKKK LLDPVPLDEE 480
  481 AKAKSTRLKR QWGTCWWEQY CILFCRGLKE RRHEYFSWLR VTQVLSTAVI LGLLWWQSDI 540
  541 RTPMGLQDQA GLLFFIAVFW GFFPVFTAIF AFPQERAMLN KERAADMYRL SAYFLARTTS 600
  601 DLPLDFILPS LFLLVVYFMT GLRISPYPFF LSMLTVFLCI IAAQGLGLAI GAILMDLKKA 660
  661 TTLASVTVMT FMLAGGFFVK KVPVFISWIR YLSFNYHTYK LLLKVQYQDF AVSINGMRID 720
  721 NGLTEVAALV VMIFGYRLLA YLSLRQMKIV T

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle