YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OFP5_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRWGRKKPV SSSSSSGLSR ALPVSWFSKL SGSSDLKPAK EKKQDEKASQ NISVKTSLSS  60
   61 TTRRSDIHEN SKRFQRVSVE KENSATRSAD KESNEKFEEI MSSVRKKVRD FQKETCGFLE 120
  121 VEAMDRDNGT VILTPRIQVN RDKQRCERRD QRLLEQKPKR SEQDAGVKVK KPARRTGTGG 180
  181 YSREDSVILG HTITKPAHQW EKLKEVKLRE VKLKADQQRK SLYLKRELNR IGTKENNKVR 240
  241 VFSPRASEKC RVKAIEDLKK AKQRAREHEL LIETADGGME NESFAVVKCS SDPQKDFRDS 300
  301 MIEMIMENGI NHPEELKELL VCYLRLNTDE YHDMIISVFQ QVHNDFNFH

Type	Start	End	Confidence
Signal Peptide	1	23	0.85
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	349	0.99