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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PMT3_ARATH
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGRSDGGQK KRVIALVCVA AVVLVFVYLF YGSSDHRASA IEYGRKLGLG GDDDDTKQDD  60
   61 TSSSFGVDDG FTPRSFPVCD DRHSELIPCL DRNLIYQMRL KLDLSLMEHY ERHCPPPERR 120
  121 FNCLIPPPNG YKVPIKWPKS RDEVWKVNIP HTHLAHEKSD QNWMVVKGDK INFPGGGTHF 180
  181 HYGADKYIAS MANMLNYPNN VLNNGGRLRT VFDVGCGVAS FGGYLLSSDI LTMSLAPNDV 240
  241 HQNQIQFALE RGIPASLGVL GTKRLPYPSR SFELSHCSRC RIDWLQRDGI LLLELDRVLR 300
  301 PGGYFAYSSP EAYAQDEEDL RIWREMSALV ERMCWKIAAK RNQTVIWQKP LTNDCYLERE 360
  361 PGTQPPLCRS DNDPDAVWGV NMEACITSYS DHDHKTKGSG LAPWPARLTS PPPRLADFGY 420
  421 STGMFEKDTE LWRQRVDTYW DLLSPRIESD TVRNIMDMKA SMGSFAAALK EKDVWVMNVV 480
  481 PEDGPNTLKL IYDRGLMGAV HSWCEAFSTY PRTYDLLHAW DIISDIKKKG CSEVDLLLEM 540
  541 DRILRPSGFI IIRDKQRVVD FVKKYLKALH WEEVGTKTDS DSDQDSDNVV FIVQKKLWLT 600
  601 SESLRDME

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle