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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP19_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNLSFIVLF LLTLFFIHHL VDASLLVKSL PGFEGPLPFE LETGYVSIGE SGDVELFYYF  60
   61 VKSERNPEND PLMIWLTGGP GCSSICGLLF ANGPLAFKGD EYNGTVPPLE LTSFSWTKVA 120
  121 NILYLEAPAG SGYSYAKTRR AFESSDTKQM HQIDQFLRSW FVKHPEFISN PFYVGGDSYS 180
  181 GKIVPGAVQQ ISLGNEKGLT PLINIQGYVL GNPVTDKNIE TNYRVPFAHG MGLISDELFE 240
  241 SLERSCGGKF FNVDPSNARC SNNLQAYDHC MSEIYSEHIL LRNCKVDYVL ADTPNIRTDR 300
  301 RRVMKEFSVN DSSSLPPPSC FTYRYFLSAF WANDENVRRA LGVKKEVGKW NRCNSQNIPY 360
  361 TFEIFNAVPY HVNNSLKGFR SLIYSGDHDS MVPFSSTQAW IRALNYSIVD DWRPWMMSSN 420
  421 QVAGYTRTYA NKMTFATIKG GGHTAEYTPD QCSLMFRRWI DGEPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle