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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NAC53_ARATH
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK ICNKPFKFDA ISVTDVYKSE PWDLPDKSRL  60
   61 KSRDLEWYFF SMLDKKYRNG SKTNRATEMG YWKTTGKDRE ILNGSKVVGM KKTLVYHKGR 120
  121 APRGERTNWV MHEYRLVDQD LDKTGVHQDA FVLCRIFQKS GSGPKNGEQY GAPFVEEEWE 180
  181 EEDDMTFVPD QEDLGSEDHV YVHMDDIDQK SENFVVYDAI PIPLNFIHGE SSNNVETNYS 240
  241 DSINYIQQTG NYMDSGGYFE QPAESYEKDQ KPIIRDRDGS LQNEGIGCGV QDKHSETLQS 300
  301 SDNIFGTDTS CYNDFPVESN YLIGEAFLDP NSNLLENDGL YLETNDLSST QQDGFDFEDY 360
  361 LTFFDETFDP SQLMGNEDVF FDQEELFQEV ETKELEKEET SRSKHVVEEK EKDEASCSKQ 420
  421 VDADATEFEP DYKYPLLKKA SHMLGAIPAP LANASEFPTK DAAIRLHAAQ SSGSVHVTAG 480
  481 MITISDSNMG WSYGKNENLD LILSLGLVQG NTAPEKSGNS SAWAMLIFMC FWVLLLSVSF 540
  541 KVSILVSSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle