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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15810423
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLKENSFEH MGIHLGEIGI VLFPWFLWLS LFLSCGYAAI TISSPLTLGQ TLSSPGGFYE  60
   61 LGFFSPNNSQ NQYVGIWFKK ITPRVVVWVA NREKPITTPV ANLTISRNGS LILLDSSKNV 120
  121 VWSTRRPSIS NKCHAKLLDT GNLVIVDDVS ENLLWQSFEN PGDTMLPYSS LMYNLATGEK 180
  181 RVLSSWKSHT DPSPGDFVVR LTPQVPAQIV TMRGSSVYKR SGPWAKTGFT GVPLMDESYT 240
  241 SPFSLSQDVG NGTGLFSYLQ RSSELTRVII TSEGYLKTFR YNGTGWVLDF ITPANLCDLY 300
  301 GACGPFGLCV TSNPTKCKCM KGFVPKYKEE WKRGNMTSGC MRRTELSCQA NLSTKTQGKG 360
  361 VDVFYRLANV KPPDLYEYAS FVDADQCHQG CLSNCSCSAF AYITGIGCLL WNHELIDTIR 420
  421 YSVGGEFLSI RLASSELAGS RRTKIIVGSI SLSIFVILAF GSYKYWRYRA KQNVGPTWAF 480
  481 FNNSQDSWKN GLEPQEISGL TFFEMNTIRA ATNNFNVSNK LGQGGFGPVY KGTLSDKKDI 540
  541 AVKRLSSSSG QGTEEFMNEI KLISKLQHRN LVRLLGCCID GEEKLLIYEF LVNKSLDTFL 600
  601 FDLALKLQID WPKRFNIIQG VSRGLLYLHR DSCMRVIHRD LKVSNILLDD KMNPKISDFG 660
  661 LARMFQGTQH QDNTRKVVGT LGYMSPEYAW TGMFSEKSDI YAFGVLLLEI ISGKKISSFC 720
  721 CGEEGKTLLG HAWECWLETG GVDLLDEDIS SSCSPVEVEV ARCVQIGLLC IQQQAVDRPN 780
  781 IAQVVTMMTS ATDLPRPKQP LFALQIQDQE SVVSVSKSVN HVTQTEIYGR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle