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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: WAK1_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.84
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVQEGLFLV AIFFSLACTQ LVKGQHQPGE NCQNKCGNIT IEYPFGISSG CYYPGNESFS  60
   61 ITCKEDRPHV LSDIEVANFN HSGQLQVLLN RSSTCYDEQG KKTEEDSSFT LENLSLSANN 120
  121 KLTAVGCNAL SLLDTFGMQN YSTACLSLCD SPPEADGECN GRGCCRVDVS APLDSYTFET 180
  181 TSGRIKHMTS FHDFSPCTYA FLVEDDKFNF SSTEDLLNLR NVMRFPVLLD WSVGNQTCEQ 240
  241 VGSTSICGGN STCLDSTPRN GYICRCNEGF DGNPYLSAGC QDVNECTTSS TIHRHNCSDP 300
  301 KTCRNKVGGF YCKCQSGYRL DTTTMSCKRK EFAWTTILLV TTIGFLVILL GVACIQQRMK 360
  361 HLKDTKLREQ FFEQNGGGML TQRLSGAGPS NVDVKIFTED GMKKATNGYA ESRILGQGGQ 420
  421 GTVYKGILPD NSIVAIKKAR LGDSSQVEQF INEVLVLSQI NHRNVVKLLG CCLETEVPLL 480
  481 VYEFITNGTL FDHLHGSMID SSLTWEHRLK IAIEVAGTLA YLHSSASIPI IHRDIKTANI 540
  541 LLDVNLTAKV ADFGASRLIP MDKEELETMV QGTLGYLDPE YYNTGLLNEK SDVYSFGVVL 600
  601 MELLSGQKAL CFKRPQSSKH LVSYFATATK ENRLDEIIGG EVMNEDNLKE IQEAARIAAE 660
  661 CTRLMGEERP RMKEVAAKLE ALRVEKTKHK WSDQYPEENE HLIGGHILSA QGETSSSIGY 720
  721 DSIKNVAILD IETGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle