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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50731319
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIALVTLEN GGGGAISSVE YATAGSTSGS TRARRQSELL HTAGSTFVPR LSDGKEGTPP  60
   61 PSPPPQVDEE RERLPPTPRG GGGRRCSSSE GSINGRAASG PQPQPHAPRS GPAAEMDPPE 120
  121 EGGHRQGMTM AAAGDEEGMK AASRSAMHHQ RVLINISGLH FETQLGTLNQ FPDTLLGDPD 180
  181 KRMRYFDPLR NEYFFDRNRP SFDGILYFYQ SGGKLRRPVN VSIDVFADEI RFYQLGKEAM 240
  241 ERFQEDEGFI REQEKPLPHS EFQRQVWLIF EYPESSSSAR AIAIVSVLVI LISIITFCLE 300
  301 TLPEFRDERE IPMSLPPQSG GLNATAGDSP PMQSPSSISD PFFIIETTCV IWFTFELLVR 360
  361 FFTCPSKPEF SRNIMNIIDI VAIIPYFITL GTELAHEQQQ PGGSSNNGSG SQQQAMSLAI 420
  421 LRVIRLVRVF RIFKLSRHSK GLQILGQTLK ASMRELGLLI FFLFIGVILF SSAAYFAEAD 480
  481 DPESHFSSIP DAFWWAVVTM TTVGYGDMRP ITVGGKIVGS LCAIAGVLTI ALPVPVIVSN 540
  541 FNYFYHRETD HEEQAMLKEE HSSAQSSITG VDGKRRSSKN SLNKSVVHLE NNEGFKSASP 600
  601 LEKTNIKAKS NVDLRKSLYA LCLDSSRETD L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle