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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50404175, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAGRGGVPG TGGLRAPPPP LLLLLLAMLP AAAPRSPALA AAPAGPSVSL YLSEDEVRRL  60
   61 LGLDAELYYV RNDLISHYAL SFNLLVPSET NFLHFTWHAK SKVEYKLGFQ VDNFVAMGMP 120
  121 QVNISAQGEV PRTLSVFRVE LSCTGKVDSE VMILMQLNLT VNSSKNFTVL NFKRRKMCYK 180
  181 KLEEVKTSAL DKNTSRTIYD PVHAAPTTST RVFYISVGVC CAVIFLVAII LAVLHLHSMK 240
  241 RIELDDSISA SSSSQGLSQP STQTTQYLRA DTPNNATPVT SSSGYPTLRI EKNDLRSVTL 300
  301 LEAKAKVKDI AISRERVTLK DVLQEGTFGR IFHGILVDEK DPNKEKQTFV KTVKDQASEV 360
  361 QVTMMLTESC KLRGLHHRNL LPITHVCIEE GEKPMVISPY MNWGNLKLFL RQCKLVEANN 420
  421 PQAISQQDLV HMAIQIACGM SYLARREVIH KDLAARNCVI DDTLQVKITD NALSRDLFPM 480
  481 DYHCLGDNEN RPVRWMALES LVNNEFSSAS DVWAFGVTLW ELMTLGQTPY VDIDPFEMAA 540
  541 YLKDGYRIAQ PINCPDELFA VMACCWALDP EERPKFQQLV QCLTEFHAAL GAYV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle