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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50582733, gi|...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPQEPAPAA NGAAPAPAPA AAAAAAGGKR RKRGRWAAAA GVGALLVALL AVAVSSRSFP  60
   61 AASSSSRGGD CGCPGTRKYT GMVEDCCCDY ETVDAINEEV LHPILQELVT LPFFRYFKVK 120
  121 LWCDCPFWPD DGMCRLRDCS VCECPENEFP EPFKKPYSGL SPDSMICQEG KPQATVDRTL 180
  181 DAKVFKGWIE TDNPWTYDDE TDNAEMTYVN LQLNPERYTG YTGDSARRIW DSVYKENCPK 240
  241 YPSEEMCQEK KALYKLISGL HSSISVHIAY DYLLDESANL WGHNLPLLYD RVLKYPERVQ 300
  301 NLYFTYLFVL RAVTKAADYL EQAEYNTGNP EEDLKTQSLV KQLLYNPKLR SACPLPFDEA 360
  361 KLWQGENGPE LKQEIQKQFR NISAIMDCVG CEKCRLWGKL QVLGLGTALK ILFSVDGENH 420
  421 LNQSLQLQRN EVIALVNLLN RLSESVNFVH EKGPSIEDVI KQQSSSTVKP VFPI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle