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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NDH2_YARLI
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLRPAVRA VSVARSVALT RSLHVSVAKF NKIEGTAPAG LPKEVKQTAG HQGHHQEIPK  60
   61 PDENHPRRKK FHFWRSLWRL TYLSAIASLG YIGYRIYVIR NPSDQLPADP SKKTLVVLGS 120
  121 GWGSVSFLKK LDTSNYNVIV VSPRNYFLFT PLLPSCPTGT IEHRSIMEPI RGIIRHKQAE 180
  181 CQYLEADATK IDHEKRIVTI RSAVSENSKE EVIKEIPFDY LVVGVGAMSS TFGIPGVQEN 240
  241 ACFLKEIPDA QQIRRTLMDC IEKAQFEKDP EVRKRLLHTV VVGGGPTGVE FAAELQDFFE 300
  301 DDLRKWIPDI RDDFKVTLVE ALPNVLPSFS KKLIDYTEKT FSDEKISILT KTMVKSVDEN 360
  361 VIRAEQTKGD GTKETLEMPY GTLVWATGNT VRPVVRELMS KIPAQKGSRR GLLVNEYLVV 420
  421 EGTEGIWALG DCSATKYAPT AQVASQEGSY LANLLNGIAK TEDLNNEITN LEKQSEHTFD 480
  481 EQERKNIFAQ LESKSRKLRR SRAMLPFEYS HQGSLAYIGS DRAVADLSFN FWGIMNWSSG 540
  541 GTMTYYFWRS AYVSMCFSMR NKILVCIDWM KVRVFGRDIS RE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle