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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50555333, gi|...
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRRHDTFIST MKQDLYKESS PPPSTTKSKG LYVIVAALVT TAIYLLYSQG YSNTHGEKDM  60
   61 PSVVPNLVLP ANPSSDHSFA VKHIYHHNTE ADANHGRMDV SGEWVRAAQK AQHLNLGQDT 120
  121 HRYMASNARD PYTNLPLKSR TQKVKRWRQR DPDHVESYLE AARLNPQLYG AMDFDWVEED 180
  181 ILVPDVTDRD TVVSLAVMAS NAYVDVPFTG DWTNVSWKET GGIGWQSDGV RGHIFVDQTP 240
  241 GSPLVVIALK GTSAAIFDSG GDTVINDKTN DNLLFSCCCA RVSYLWNTVC DCYTGESYTC 300
  301 DQECLEKELY AEDRYYRAVL DIYRNVTHLY PQKQIWVTGH SLGGALSAML GRTYGIPAVG 360
  361 YEAPGELLPT KRLHLPSPPG IPWSQEHIWH FGHTADPIFM GVCNGASSSC SIGGYAMETS 420
  421 CHSGLQCMYD VVTDKGWHLS MVNHRIHTVI DEVLLAYNET AACVPPPPCQ DCFNWNFVMG 480
  481 NDKDDDDKDK KKKKKTSTSS SVVSKTKTST SSTVATNTMP SLPDPTCVER NWYGKCIRYD 540
  541 PEIKQQYGDS HTVTHVTMA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle