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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP15_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASWIFKLLL LLQCVLVLIQ HADSSSIIRY LPGFEGPLPF ELETGYIGVG QKEEDQLFYY  60
   61 FIKSENNPEE DPLLVWLTGG PGCSSFSGLV YENGPLAFKV ETYNGSVPTL VSTTYSWTKV 120
  121 ANIIYLDQPV GTGFSYSRNP FADIPSDTGS VKRVNEFVRK WLAKHPEYFS NPFYVTGNSY 180
  181 SGKVIPAIVQ EISNGNYICC KPQINLQGYV IGNPVAYYDH DKDFRIPFAH GVALISDELF 240
  241 ESLKASCGGS YSVVDPLNTE CLKLIEDYDK CVSGIYEELI LKSKCEHTSP DCYTYRYLLS 300
  301 EYWADNETVR RALKVVKGSK GTWERCDYRV LSNQDIKSSI PFHINNSIRG YRSLVISGDH 360
  361 DMTIPFLGTQ AWIRSLNYSI TEKWRPWMIL DQVAGYTKTY ANKMTLATVK GGGHTLEYKP 420
  421 EENSVLFKRW ISGQPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle