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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATG15_DEBHA
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQLGEEHPL ISTKRPRAKK RRSIAICAAV LTLIAFGFIR FVPKDILAGG WYEGEKDGLS  60
   61 ALDNEEVRDM QTDGTTFELK HIFHRGTGSH NYMVHRRLDV TKEYLEAHSE ELEELTTMQT 120
  121 SEVDESNLQD VYDAYDWPQA HTGKNPWTIK LQIRQSPTNG VVKRLKERHT PNFLDSYLAY 180
  181 ALSVKGNPAL LNKIELEWED EHEIPIPDVK DRDTVVSLAT ISSNAYVKFP KDDKEKKRLD 240
  241 WIDVGDPWVP DENHTDINFG WADDGLRGHV FVSTDNKTVV IGIKGTSGAG LIGTGPEETT 300
  301 ANDKLNDNLL FLCCCARVGY MWTTVCDCYQ KAYTCDQDCL EKELMRQDRY YQATLDLYRN 360
  361 VSQLYDPLTT NIWVTGHSLG GALASLVGRT YGLPAVAFEA PGEMLATRRL HLPQPPGLPK 420
  421 HLENIWHFGN TADPIYMGVC NGVSSSCNVA GYAMETACHT AHQCVYDVVT DMGWRVNLLN 480
  481 HRIHTVIDDI ILAYNDTPPC VQQPPCRDCF NWRFTSSDDN KNDEPPLPNP LHPKPPSTVR 540
  541 SSNMPHEQSP NASRSLSSLC TEPSCTSSFQ SVSPSFSSQL PSHPSQNPQR CLRRTWYGRC 600
  601 SKWGHNSAAH HVSSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle