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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49655092, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTNSSRNQ QSAISRQRGI LNTPKLAELL KNMSMVSFKL FAVGLLLYNC YHLLVALNLY  60
   61 YHTSVTLDAS IPWFHVLVPD TIFEYSPDVF NSNRYMATPK DQVNIGPTTD MYWPIFLGFC 120
  121 FLLFIETFVS VVQGKQPYTE SGITIFEHSL AFQEVSSTGF FGSSRLYKRP TEQVLIACIF 180
  181 LTLNHLNIHI GGLLNNNRYR LIPLSIIGLA FLTYFVSCFT NGNIWTFPTI IIMSFVPQVL 240
  241 IMLIIFVSVF IFSMAVLAKG FQLQDLNYAS FLLYENNESD SEFRTRNLNI NLHDDFYTAL 300
  301 LNLGMLAITL AGKSSYITEL SLVTVDEDTW IERSIWQKLK YQAKSVASLQ AKLNTNNVTD 360
  361 YLKENKISGY GNMIMTPSKR LISGERTDLF NDDTSDLKNS KSISVLRKRI LFLKEIVSDL 420
  421 IQLLYGLIID SFLLYFIPKK FSHYVLRRQN RENTNIDETD EEFERRKRKT PAFLRPYIKR 480
  481 NAKSLTKVHF DQKEVIQSQS VDLNDYSEEQ LAQNYISLLL EKELSEIDDS EDYYQTNHYE 540
  541 LDLEEESDIE SIDISSSTTV SGNRVIDDVS HTLIDELLSP EEFQNLFSSA NVDILQRHLN 600
  601 HDSQTSGILT RSKFNSLTSG IAIQESTLSS QDEISKLLEL ILNKRKSQLE DLSSDNSNRH 660
  661 TDDYDLNSKL DCVICQTNVR EIITWPCKCF AICESCRLSL ISKGIEGCVC CRRDVEGVSK 720
  721 VFIP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle