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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT3G_ARATH
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSSLIVPN NKKHFVVVFI GLVLIFKIAL ITAANEKSQI YTVHLGERQH DDPNIVTESH  60
   61 HDILGPLLGS KKASHESMIY SYRHGFSGFA AKLTSSQARE LSGHPDVVRV TRSKNMKLKT 120
  121 TRVSDYLGLT SAAPTGLLHE TDMGSEAIVG ILDSGIWPDS KSFNDNGLGP IPTRWKGKCV 180
  181 SAEAFNASSC NRKLIGAMYY SKGLESKYNG SFNAAEKGEV MSPLDKIGHG THCASTAVGS 240
  241 FVPDANVLSL AQGTARGSAP RARIASYKVC WNNEECFTPD IVKAIDHAIR DGVDVLSLSL 300
  301 GSEVPVDFEV DRDDFAIAAF HAVMKGIPVV CAGGNDGPEK ETISNVAPWL ITVAATTMDR 360
  361 EYFTPITLGN NITLLGQEGL YIGEEVGFTD LLFYDDVTRE DMEAGKATGK ILLFFQRANF 420
  421 EDDFAAYAKS KGAVGVIIAT QPTDSIDAST VDIAIAYVDN ELGMDILLYI QTTKSPIAKI 480
  481 SPTKTFVGRP LATKVARFSS RGPNSLSPVI LKPDIAAPGS GILAAVPTGG GYDFMSGTSM 540
  541 STPVVSGIVA LLRKKRPDWS PAAIRSALVT TALQTDPSGE PIAAEGSPRK LADPFDYGGG 600
  601 LVNPVKVADP GLVYDMGHDE YVHYLCSAGY DNTSISKLLG EIYTCPTPIP SMLDVNMPSI 660
  661 TIPYLSEEIT ITRTVTNVGP VGSVYKAVIQ APQGINLQVS PETLEFGSNT NKTTFTVKVS 720
  721 TTHRANTDYL FGSLTWADNE GHNVRIPLSV RTRVFNFKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle